Difference between revisions of "Methods"

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==Key references==
 
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Additional publications: {{PubMed|22179594}}
 
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<pubmed>22179594 20057169 20134232 21542786 20300532 19698693</pubmed>
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Revision as of 17:18, 9 February 2012

Here you can find a list of methods for working with Bacillus subtilis:

Analysis of protein-protein interactions

  • Bacterial Two Hybrid: BACTH

Strain construction

  • introduction of markerfree deletions: PubMed

RNA analysis

  • Mechanical cell disruption and extraction of RNA from B. subtilis: Media:SOP-RNA.pdf

Work with non-domesticated strains

  • transformation of wild-type B. subtilis strains incl. NCIB3610: PubMed

General procedures

  • Standard operation procedures (SOPs) of the SYSMO-BACELL consortium

Live cell imaging

  • Live cell imaging of B. subtilis cells using automated time-lapse microscopy PubMed
  • Assay of gene expression dynamics using live cell imaging PubMed

Transposon mutagenesis

  • mariner transposon mutagenesis for random inducible-expression insertions and transcriptional reporter fusion insertions PubMed

Protein-DNA interactions

  • ChAP-chip: A modified ChIP-chip protocol for the in vivo identification of binding sites of DNA-binding proteins PubMed

Key references

Additional publications: PubMed

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