Difference between revisions of "Dat"
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yheN]]'', ''[[nhaC]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yheN]]'', ''[[nhaC]]'' | ||
|- | |- | ||
− | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU09670 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU09670 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU09670 | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU09670 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU09670 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU09670 DNA_with_flanks] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:dat_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:dat_context.gif]] |
Revision as of 09:48, 14 May 2013
(Another gene coding for O6-methylguanine DNA alkyltransferase was formely known as dat, it is now called ogt)
Gene name | dat |
Synonyms | yheM |
Essential | no |
Product | D-alanine aminotransferase |
Function | peptidoglycan precursor biosynthesis |
Gene expression levels in SubtiExpress: dat | |
Metabolic function and regulation of this protein in SubtiPathways: Cell wall | |
MW, pI | 31 kDa, 4.871 |
Gene length, protein length | 846 bp, 282 aa |
Immediate neighbours | yheN, nhaC |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
cell wall synthesis, biosynthesis of cell wall components
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU09670
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: D-alanine + 2-oxoglutarate = pyruvate + D-glutamate (according to Swiss-Prot)
- Protein family: class-IV pyridoxal-phosphate-dependent aminotransferase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure: 1G2W (E177S Mutant, Geobacillus stearothermophilus, 43% identity)
- UniProt: O07597
- KEGG entry: [2]
- E.C. number: 2.6.1.21
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References