Difference between revisions of "GlpD"
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= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=glpD_1004975_1006642_1 glpD] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=glpD_1004975_1006642_1 glpD] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' [[SigA]] {{PubMed|1809833}} | + | * '''[[Sigma factor]]:''' [[SigA]] {{PubMed|1809833}} |
* '''Regulation:''' | * '''Regulation:''' | ||
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=References= | =References= | ||
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[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 19:47, 18 June 2013
- Description: glycerol-3-phosphate dehydrogenase (menaquinone 7)
| Gene name | glpD |
| Synonyms | |
| Essential | no |
| Product | glycerol-3-phosphate dehydrogenase (menaquinone 7) |
| Function | glycerol utilization |
| Gene expression levels in SubtiExpress: glpD | |
| Metabolic function and regulation of this protein in SubtiPathways: Sugar catabolism | |
| MW, pI | 62 kDa, 8.002 |
| Gene length, protein length | 1665 bp, 555 aa |
| Immediate neighbours | glpK, pgcA |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
utilization of specific carbon sources, utilization of lipids
This gene is a member of the following regulons
AbrB regulon, CcpA regulon, GlpP regulon
The gene
Basic information
- Locus tag: BSU09300
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol (according to Swiss-Prot)
- Protein family: FAD-dependent glycerol-3-phosphate dehydrogenase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s): FAD
- Effectors of protein activity:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- Structure: 3DA1 (from Bacillus halodurans, 57% identity, 72% similarity)
- UniProt: P18158
- KEGG entry: [3]
- E.C. number: 1.1.5.3
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant: QB5347 (cat), available in the Stülke lab
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
