Difference between revisions of "PhrE"
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= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=phrE_2660330_2660464_1 phrE] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=phrE_2660330_2660464_1 phrE] {{PubMed|22383849}} | ||
− | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' |
** ''[[phrE]]'': [[SigA]] {{PubMed|11466295}}, [[SigH]] {{PubMed|11466295}} | ** ''[[phrE]]'': [[SigA]] {{PubMed|11466295}}, [[SigH]] {{PubMed|11466295}} | ||
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=References= | =References= | ||
− | + | <pubmed>12618455,12850135,11466295,10629174 21821766 20817675</pubmed> | |
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− | <pubmed>12618455,12850135,11466295,10629174 21821766</pubmed> | ||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] |
Revision as of 20:39, 18 June 2013
- Description: response regulator aspartate phosphatase (RapE) regulator, control of the phosphorelay
Gene name | phrE |
Synonyms | |
Essential | no |
Product | phosphatase (RapE) regulator |
Function | control of sporulation initiation |
Gene expression levels in SubtiExpress: phrE | |
Interactions involving this protein in SubtInteract: PhrE | |
Function and regulation of this protein in SubtiPathways: Phosphorelay | |
MW, pI | 4 kDa, 8.863 |
Gene length, protein length | 132 bp, 44 aa |
Immediate neighbours | rapE, yqzI |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
phosphorelay, quorum sensing, Skin element, short peptides
This gene is a member of the following regulons
AbrB regulon, CcpA regulon, CodY regulon, ComA regulon, SigH regulon
The gene
Basic information
- Locus tag: BSU25840
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
- A mutation was found in this gene after evolution under relaxed selection for sporulation PubMed
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: phr family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O32025
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References