Difference between revisions of "YabC"
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU00360&redirect=T BSU00360] | ||
* '''DBTBS entry:''' no entry | * '''DBTBS entry:''' no entry | ||
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU00360&redirect=T BSU00360] | ||
* '''Structure:''' [http://www.pdb.org/pdb/explore/explore.do?structureId=3kwp 3KWP] (from ''Lactobacillus brevis'', 51% identity) | * '''Structure:''' [http://www.pdb.org/pdb/explore/explore.do?structureId=3kwp 3KWP] (from ''Lactobacillus brevis'', 51% identity) | ||
Revision as of 12:45, 2 April 2014
- Description: similar to 16S rRNA methyltransferase
| Gene name | yabC |
| Synonyms | |
| Essential | no |
| Product | 16S rRNA methyltransferase |
| Function | rRNA modification |
| Gene expression levels in SubtiExpress: yabC | |
| MW, pI | 32 kDa, 5.518 |
| Gene length, protein length | 876 bp, 292 aa |
| Immediate neighbours | yazA, abrB |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU00360
Phenotypes of a mutant
Database entries
- BsubCyc: BSU00360
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
- The E.coli homolog: rsmI
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: UPF0011 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU00360
- Structure: 3KWP (from Lactobacillus brevis, 51% identity)
- UniProt: P37544
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
