Difference between revisions of "DtpT"

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m (Jstuelk moved page YclF to DtpT: 25966844)
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|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''yclF''
+
|''dtpT''
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' dtpT''
+
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yclF ''
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
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|style="background:#ABCDEF;" align="center"|'''Function''' || uptake of di- and tripeptides
 
|style="background:#ABCDEF;" align="center"|'''Function''' || uptake of di- and tripeptides
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU03670 yclF]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU03670 dtpT]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 53 kDa, 9.92   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 53 kDa, 9.92   
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* '''Operon:'''  
 
* '''Operon:'''  
  
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=dtpT_416235_417713_-1 yclF] {{PubMed|22383849}}
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=dtpT_416235_417713_-1 dtpT] {{PubMed|22383849}}
  
 
* '''Sigma factor:'''  
 
* '''Sigma factor:'''  
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=References=
 
=References=
  
<pubmed>11717292, 8458848 23798427 </pubmed>
+
<pubmed>11717292, 8458848 23798427 25966844</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 13:03, 15 May 2015

  • Description: proton-dependent di- and tripeptide transporter

Gene name dtpT
Synonyms yclF
Essential no
Product peptide transporter
Function uptake of di- and tripeptides
Gene expression levels in SubtiExpress: dtpT
MW, pI 53 kDa, 9.92
Gene length, protein length 1476 bp, 492 aa
Immediate neighbours yclE, yclG
Sequences Protein DNA DNA_with_flanks
Genetic context
YclF context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YclF expression.png















Categories containing this gene/protein

transporters/ other, utilization of nitrogen sources other than amino acids, membrane proteins, sporulation proteins

This gene is a member of the following regulons

ScoC regulon

The gene

Basic information

  • Locus tag: BSU03670

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: POT family of secondary (PMF-dependent) transporters
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
    • 4IKV, the protein from Geobacillus kaustophilus (65% identity, 87% similarity), PubMed
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
    • repressed during exponential growth (ScoC) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References