Difference between revisions of "RplR"
| Line 91: | Line 91: | ||
=Expression and regulation= | =Expression and regulation= | ||
| + | * '''Operon:''' ''[[rpsJ]]-[[rplC]]-[[rplD]]-[[rplW]]-[[rplB]]-[[rpsS]]-[[rplV]]-[[rpsC]]-[[rplP]]-[[rpmC]]-[[rpsQ]]-[[rplN]]-[[rplX]]-[[rplE]]-[[rpsN]]-[[rpsH]]-[[rplF]]-[[rplR]]-[[rpsE]]-[[rpmD]]-[[rplO]]'' {{PubMed|9371452}} | ||
| − | * ''' | + | * '''[[Sigma factor]]:''' |
| − | + | ** [[SigA]] two promoters, about 140bp and 200bp upstream of the start codon {{PubMed|9371452}} | |
| − | * | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| Line 123: | Line 123: | ||
=References= | =References= | ||
| − | <pubmed>8635744,, ,19653700 </pubmed> | + | <pubmed>8635744,9371452, 11948165,19653700 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 19:55, 16 June 2010
- Description: ribosomal protein
| Gene name | rplR |
| Synonyms | |
| Essential | yes PubMed |
| Product | ribosomal protein L18 |
| Function | translation |
| MW, pI | 12 kDa, 10.46 |
| Gene length, protein length | 360 bp, 120 aa |
| Immediate neighbours | rplF, rpsE |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU01320
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: ribosomal protein L18P family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure: 1OVY (Geobacillus stearothermophilus)
- UniProt: P46899
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon: rpsJ-rplC-rplD-rplW-rplB-rpsS-rplV-rpsC-rplP-rpmC-rpsQ-rplN-rplX-rplE-rpsN-rpsH-rplF-rplR-rpsE-rpmD-rplO PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
