Difference between revisions of "GerD"
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| + | = [[Categories]] containing this gene/protein = | ||
| + | {{SubtiWiki category|[[germination]]}}, | ||
| + | {{SubtiWiki category|[[membrane proteins]]}} | ||
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| + | = This gene is a member of the following [[regulons]] = | ||
| + | {{SubtiWiki regulon|[[SigF regulon]]}}, | ||
| + | {{SubtiWiki regulon|[[SigG regulon]]}} | ||
=The gene= | =The gene= | ||
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=The protein= | =The protein= | ||
Revision as of 15:42, 8 December 2010
- Description: required for fast repsonse to the presence of germinants
| Gene name | gerD |
| Synonyms | |
| Essential | no |
| Product | lipoprotein |
| Function | germination |
| MW, pI | 20 kDa, 4.862 |
| Gene length, protein length | 555 bp, 185 aa |
| Immediate neighbours | salA, kbaA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
germination, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU01550
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: inner spore membrane, spore coat, cortex, germ cell wall, some GerD is also present in the soluble fraction PubMed
Database entries
- Structure:
- UniProt: P16450
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody: available in Anne Moir lab
Labs working on this gene/protein
Anne Moir, University of Sheffield, UK
Your additional remarks
References
Wiyada Mongkolthanaruk, Carl Robinson, Anne Moir
Localization of the GerD spore germination protein in the Bacillus subtilis spore.
Microbiology (Reading): 2009, 155(Pt 4);1146-1151
[PubMed:19332816]
[WorldCat.org]
[DOI]
(P p)
Patricia L Pelczar, Peter Setlow
Localization of the germination protein GerD to the inner membrane in Bacillus subtilis spores.
J Bacteriol: 2008, 190(16);5635-41
[PubMed:18556788]
[WorldCat.org]
[DOI]
(I p)
Patricia L Pelczar, Takao Igarashi, Barbara Setlow, Peter Setlow
Role of GerD in germination of Bacillus subtilis spores.
J Bacteriol: 2007, 189(3);1090-8
[PubMed:17122337]
[WorldCat.org]
[DOI]
(P p)
E H Kemp, R L Sammons, A Moir, D Sun, P Setlow
Analysis of transcriptional control of the gerD spore germination gene of Bacillus subtilis 168.
J Bacteriol: 1991, 173(15);4646-52
[PubMed:1906867]
[WorldCat.org]
[DOI]
(P p)
J R Yon, R L Sammons, D A Smith
Cloning and sequencing of the gerD gene of Bacillus subtilis.
J Gen Microbiol: 1989, 135(12);3431-45
[PubMed:2517635]
[WorldCat.org]
[DOI]
(P p)
