Difference between revisions of "GyrB"
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| − | * '''Description:''' DNA | + | * '''Description:''' DNA gyrase (subunit B) <br/><br/> |
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|style="background:#ABCDEF;" align="center"| '''Essential''' || yes [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed] | |style="background:#ABCDEF;" align="center"| '''Essential''' || yes [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed] | ||
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| − | |style="background:#ABCDEF;" align="center"| '''Product''' || DNA | + | |style="background:#ABCDEF;" align="center"| '''Product''' || DNA gyrase (subunit B) |
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|style="background:#ABCDEF;" align="center"|'''Function''' || DNA supercoiling, <br/>initation of replication cycle and DNA elongation | |style="background:#ABCDEF;" align="center"|'''Function''' || DNA supercoiling, <br/>initation of replication cycle and DNA elongation | ||
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=References= | =References= | ||
| − | + | '''Additional references:''' {{PubMed|20870749}} | |
<pubmed>17981983 ,9539793 , 2987848 19666507 17320901 20509597 </pubmed> | <pubmed>17981983 ,9539793 , 2987848 19666507 17320901 20509597 </pubmed> | ||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 10:30, 25 January 2011
- Description: DNA gyrase (subunit B)
| Gene name | gyrB |
| Synonyms | novA |
| Essential | yes PubMed |
| Product | DNA gyrase (subunit B) |
| Function | DNA supercoiling, initation of replication cycle and DNA elongation |
| MW, pI | 71 kDa, 5.378 |
| Gene length, protein length | 1914 bp, 638 aa |
| Immediate neighbours | yaaB, gyrA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
DNA condensation/ segregation, essential genes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU00060
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: ATP-dependent breakage, passage and rejoining of double-stranded DNA (according to Swiss-Prot)
- Protein family: type II topoisomerase family (according to Swiss-Prot)
- Paralogous protein(s): ParE
Extended information on the protein
- Kinetic information:
- Domains:
- Modification: phosphorylated on Ser-400 PubMed
- Cofactor(s):
- Effectors of protein activity:
- Localization: nucleoid-associated in actively growing cells PubMed
Database entries
- Structure:
- UniProt: P05652
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information: GyrB is subject to Clp-dependent proteolysis upon glucose starvation PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Dagmar Klostermeier, Biozentrum Basel, Switzerland homepage
Your additional remarks
References
Additional references: PubMed
