Difference between revisions of "RodZ"
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= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
| − | {{SubtiWiki category|[[cell shape]]}} | + | {{SubtiWiki category|[[cell shape]]}}, |
| + | {{SubtiWiki category|[[membrane proteins]]}} | ||
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
| Line 54: | Line 55: | ||
=== Additional information=== | === Additional information=== | ||
| − | |||
| − | |||
| Line 80: | Line 79: | ||
* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
| − | * '''Interactions:''' | + | * '''[[SubtInteract|Interactions]]:''' |
| + | ** part of the [[cell wall biosynthetic complex]] {{PubMed|21636744,21636745}} | ||
| − | * '''Localization:''' | + | * '''Localization:''' membrane protein (according to Swiss Prot) |
=== Database entries === | === Database entries === | ||
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=References= | =References= | ||
| − | <pubmed>19164570, </pubmed> | + | <pubmed>19164570, 21636744,21636745</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 05:21, 11 July 2011
- Description: required for cell shape determination
| Gene name | rodZ |
| Synonyms | ymfM |
| Essential | no |
| Product | morphogenic protein |
| Function | required for cell shape determination |
| MW, pI | 23 kDa, 4.679 |
| Gene length, protein length | 639 bp, 213 aa |
| Immediate neighbours | ymfL, pgsA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU16910
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- part of the cell wall biosynthetic complex PubMed
- Localization: membrane protein (according to Swiss Prot)
Database entries
- Structure:
- UniProt: O31771
- KEGG entry: [2]
- E.C. number:
Additional information
overexpression results in growth inhibition in minimal medium (in the absence of Mg2+ ) PubMed
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Adriano Henriques, Lisbon, Portugal homepage
Your additional remarks
References
