Difference between revisions of "YtrA"
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| − | * '''Description:''' [[transcription factors|transcriptional repressor]] | + | * '''Description:''' [[transcription factors|transcriptional repressor]], [[GntR family]], control of cell envelope stress responses in response to ramoplanin <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
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|style="background:#ABCDEF;" align="center"| '''Product''' || [[transcription factors|transcriptional repressor]] ([[GntR family]]) | |style="background:#ABCDEF;" align="center"| '''Product''' || [[transcription factors|transcriptional repressor]] ([[GntR family]]) | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Function''' || | + | |style="background:#ABCDEF;" align="center"|'''Function''' || control of cell envelope stress responses |
|- | |- | ||
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/carbon_flow.html Central C-metabolism]''' | |colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/carbon_flow.html Central C-metabolism]''' | ||
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= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
{{SubtiWiki regulon|[[YtrA regulon]]}} | {{SubtiWiki regulon|[[YtrA regulon]]}} | ||
| − | =The [[YtrA regulon]] | + | =The [[YtrA regulon]]= |
| − | + | ||
=The gene= | =The gene= | ||
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=== Additional information=== | === Additional information=== | ||
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| − | |||
Revision as of 19:37, 19 August 2011
- Description: transcriptional repressor, GntR family, control of cell envelope stress responses in response to ramoplanin
| Gene name | ytrA |
| Synonyms | |
| Essential | no |
| Product | transcriptional repressor (GntR family) |
| Function | control of cell envelope stress responses |
| Metabolic function and regulation of this protein in SubtiPathways: Central C-metabolism | |
| MW, pI | 14 kDa, 8.094 |
| Gene length, protein length | 390 bp, 130 aa |
| Immediate neighbours | ytrB, ytzC |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
utilization of specific carbon sources, transcription factors and their control, cold stress proteins
This gene is a member of the following regulons
The YtrA regulon
The gene
Basic information
- Locus tag: BSU30460
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure: 3NEU (similar protein from Listeria innocua, 41% identity)
- UniProt: O34712
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Carsten L Beckering, Leif Steil, Michael H W Weber, Uwe Völker, Mohamed A Marahiel
Genomewide transcriptional analysis of the cold shock response in Bacillus subtilis.
J Bacteriol: 2002, 184(22);6395-402
[PubMed:12399512]
[WorldCat.org]
[DOI]
(P p)
K I Yoshida, Y Fujita, S D Ehrlich
An operon for a putative ATP-binding cassette transport system involved in acetoin utilization of Bacillus subtilis.
J Bacteriol: 2000, 182(19);5454-61
[PubMed:10986249]
[WorldCat.org]
[DOI]
(P p)
