Difference between revisions of "GltR"
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* '''Operon:''' ''gltR'' (according to [http://dbtbs.hgc.jp/COG/prom/gltR.html DBTBS]) | * '''Operon:''' ''gltR'' (according to [http://dbtbs.hgc.jp/COG/prom/gltR.html DBTBS]) | ||
− | * '''[ | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=gltR_2725837_2726727_1 gltR] {{PubMed|22383849}} |
+ | |||
+ | * '''Sigma factor:''' [[SigA]] {{PubMed|9023181}} | ||
* '''Regulation:''' | * '''Regulation:''' | ||
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** [[GltR]]: negative autoregulation {{PubMed|9023181}} | ** [[GltR]]: negative autoregulation {{PubMed|9023181}} | ||
− | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = |
Revision as of 12:07, 16 April 2012
- Description: transcriptional regulator (LysR family)
Gene name | gltR |
Synonyms | yrdL |
Essential | no |
Product | transcriptional regulator (LysR family) |
Function | unknown |
MW, pI | 32 kDa, 6.653 |
Gene length, protein length | 888 bp, 296 aa |
Immediate neighbours | yrdN, yrdK |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
Categories containing this gene/protein
transcription factors and their control
This gene is a member of the following regulons
The GltR regulon:
The gene
Basic information
- Locus tag: BSU26670
Phenotypes of a mutant
The function of this protein is unknown. However, certain mutant forms are able to activate expression of the gltA-gltB operon (and thus to replace the cognate activator protein GltC)
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: LysR family of transcription factors
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P94501
- KEGG entry: [3]
- E.C. number:
Additional information
The function of this protein is unknown. However, certain mutant forms are able to activate expression of the gltA-gltB operon (and thus to replace the cognate activator protein GltC)
Expression and regulation
- Operon: gltR (according to DBTBS)
- Regulation:
- Additional information:
Biological materials
- Mutant: GP345 (erm), available in the Stülke lab
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Linc Sonenshein, Tufts University, Boston, MA, USA Homepage
Your additional remarks
References