Difference between revisions of "Main Page"
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<big>'''Upcoming events:'''</big> | <big>'''Upcoming events:'''</big> | ||
* '''April 16 - 19, 2012:''' The 5th European Spore Conference will take place in London, UK. [mailto:[email protected] contact], [http://www.sporesconference.com conference website] | * '''April 16 - 19, 2012:''' The 5th European Spore Conference will take place in London, UK. [mailto:[email protected] contact], [http://www.sporesconference.com conference website] | ||
| − | * '''April 24 - 25, 2012:''' The BACELL meeting 2012 will be organized by [[Kevin Devine]] in Dublin, Ireland. [mailto:[email protected] contact] | + | * '''April 24 - 25, 2012:''' The BACELL meeting 2012 will be organized by [[Kevin Devine]] in Dublin, Ireland. [mailto:[email protected] contact], '''The deadline for registration is approaching!''' |
'''[[Past conferences]]''' | '''[[Past conferences]]''' | ||
| Line 20: | Line 20: | ||
<br/> | <br/> | ||
| − | <big>'''Paper of the month: | + | <big>'''Paper of the month: March 2012'''</big> |
| − | * [http://www.ncbi.nlm.nih.gov/pubmed/ | + | * [http://www.ncbi.nlm.nih.gov/pubmed/22333917 Beckmann ''et al''.] from the lab of [[Roland Hartmann]] show how [[bsrA|6S RNA]] is released from [[RNA polymerase]] upon interaction with short 'product' RNAs (pRNAs) that are formed as a product of the interaction between [[SigA]]-containing [[RNA polymerase]] and [[bsrA|6S RNA]]. |
| − | * '''Relevant ''Subti''Wiki pages:''' [[ | + | * '''Relevant ''Subti''Wiki pages:''' [[Roland Hartmann]], [[bsrA|6S RNA]], [[SigA]], [[RNA polymerase]], [[transcription]] |
| − | + | ''Beckmann BM, Hoch PG, Marz M, Willkomm DK, Salas M, Hartmann RK'' | |
| − | + | '''A pRNA-induced structural rearrangement triggers 6S-1 RNA release from RNA polymerase in ''Bacillus subtilis''.''' | |
| − | + | EMBO J. 2012, Feb 14. doi: 10.1038/emboj.2012.23. [Epub ahead of print] | |
| + | {{PubMed|22333917}} | ||
* [[Previous papers of the month]] | * [[Previous papers of the month]] | ||
Revision as of 14:26, 1 March 2012
Welcome to SubtiWiki! - Bacillus subtilis annotation the "wiki" way!
Contact: General Microbiology, University of Göttingen, send mail
Upcoming events:
- April 16 - 19, 2012: The 5th European Spore Conference will take place in London, UK. contact, conference website
- April 24 - 25, 2012: The BACELL meeting 2012 will be organized by Kevin Devine in Dublin, Ireland. contact, The deadline for registration is approaching!
New: Subtiwiki is now on Facebook - please give it a +1!
Now online: A description of SubtiWiki, SubtiPathways, and SubtInteract in the 2012 Database issue of Nucleic Acids Research
Ulrike Mäder, Arne G Schmeisky, Lope A Flórez, Jörg Stülke
SubtiWiki--a comprehensive community resource for the model organism Bacillus subtilis.
Nucleic Acids Res: 2012, 40(Database issue);D1278-87
[PubMed:22096228]
[WorldCat.org]
[DOI]
(I p)
Paper of the month: March 2012
- Beckmann et al. from the lab of Roland Hartmann show how 6S RNA is released from RNA polymerase upon interaction with short 'product' RNAs (pRNAs) that are formed as a product of the interaction between SigA-containing RNA polymerase and 6S RNA.
- Relevant SubtiWiki pages: Roland Hartmann, 6S RNA, SigA, RNA polymerase, transcription
Beckmann BM, Hoch PG, Marz M, Willkomm DK, Salas M, Hartmann RK A pRNA-induced structural rearrangement triggers 6S-1 RNA release from RNA polymerase in Bacillus subtilis. EMBO J. 2012, Feb 14. doi: 10.1038/emboj.2012.23. [Epub ahead of print] PubMed
New procedure for account creation:
- Due to massive spam attacks, we had to change our policy for the creation of accounts. If you want to create an account, just send me a mail. We will create the account for you as quickly as possible, then you can change your password. This does not affect existing accounts, which remain active.
- Please remember that all members of the Bacillus community are invited to create accounts and to contribute to SubtiWiki!
News in SubtiWiki:
- June 2011: updated Excel files that map all genes to categories and regulons as well as the general updated identity mapping of all genes were uploaded.
- April 2011: SubtInteract, a presentation of protein-protein interactions in B. subtilis, is online!
- December 2010: SubtiCellPublisher allows the conversion of CellDesigner diagrams to navigatable presentations in the style of SubtiPathways
- December 2010: all genes are linked to regulons, and the pages of the regulons provide an overview on all genes that are members of this specific regulon.
- December 2010: all genes/proteins are linked to categories, and the pages of the categories provide an overview on all genes/proteins that are members of this specific category.
- August 2010: several new pathway maps including Utilization of other nitrogen sources, Biotin synthesis, Murein recycling, and Protein secretion were uploaded to SubtiPathways
- March 2010: novel plasmids for the creation of strains expressing proteins with a C-terminal triple FLAG-tag (for simple immunological analysis of the proteins, pGP1087 and pGP1331)
Publications describing SubtiWiki and SubtiPathways:
Lope A Flórez, Sebastian F Roppel, Arne G Schmeisky, Christoph R Lammers, Jörg Stülke
A community-curated consensual annotation that is continuously updated: the Bacillus subtilis centred wiki SubtiWiki.
Database (Oxford): 2009, 2009;bap012
[PubMed:20157485]
[WorldCat.org]
[DOI]
(I p)
Christoph R Lammers, Lope A Flórez, Arne G Schmeisky, Sebastian F Roppel, Ulrike Mäder, Leendert Hamoen, Jörg Stülke
Connecting parts with processes: SubtiWiki and SubtiPathways integrate gene and pathway annotation for Bacillus subtilis.
Microbiology (Reading): 2010, 156(Pt 3);849-859
[PubMed:19959575]
[WorldCat.org]
[DOI]
(I p)
