Difference between revisions of "BofA"
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|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[SigK]] activation | |style="background:#ABCDEF;" align="center"|'''Function''' || control of [[SigK]] activation | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU00230 bofA] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/BofA BofA] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/BofA BofA] | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yaaL]]'', ''[[rrnA-16S]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yaaL]]'', ''[[rrnA-16S]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU00230 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU00230 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU00230 Advanced_DNA] |
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Revision as of 11:53, 13 May 2013
- Description: inhibition of the pro-sigma-K processing machinery
| Gene name | bofA |
| Synonyms | |
| Essential | no |
| Product | inhibitor of pro-SigK processing |
| Function | control of SigK activation |
| Gene expression levels in SubtiExpress: bofA | |
| Interactions involving this protein in SubtInteract: BofA | |
| MW, pI | 8 kDa, 9.32 |
| Gene length, protein length | 261 bp, 87 aa |
| Immediate neighbours | yaaL, rrnA-16S |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
sigma factors and their control, sporulation proteins, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU00230
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: forespore outer membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P24282
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: bofA PubMed
- Regulation: expressed during sporulation PubMed
- Additional information: the mRNA is very stable (half-life > 15 min) PubMed
Biological materials
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Simon Cutting, London, UK homepage
Your additional remarks
References
