Difference between revisions of "YdfH"
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| − | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ydfH_587744_588967_1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:ydfH_expression.png|500px]] | + | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ydfH_587744_588967_1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:ydfH_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU05410]] |
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Revision as of 12:38, 16 May 2013
- Description: two-component sensor kinase, control of ydfJ expression
| Gene name | ydfH |
| Synonyms | |
| Essential | no |
| Product | two-component sensor kinase (NarL family) |
| Function | control of ydfJ expression |
| Gene expression levels in SubtiExpress: ydfH | |
| Interactions involving this protein in SubtInteract: YdfH | |
| MW, pI | 46 kDa, 9.598 |
| Gene length, protein length | 1221 bp, 407 aa |
| Immediate neighbours | ydzQ, ydfI |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
protein modification, transcription factors and their control, membrane proteins, phosphoproteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU05410
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: autophosphorylation, phosphorylation of YdfI
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains: 4 transmembrane segments
- Modification: autophosphorylation on a His residue
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P96685
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Masakuni Serizawa, Junichi Sekiguchi
The Bacillus subtilis YdfHI two-component system regulates the transcription of ydfJ, a member of the RND superfamily.
Microbiology (Reading): 2005, 151(Pt 6);1769-1778
[PubMed:15941986]
[WorldCat.org]
[DOI]
(P p)
C Fabret, V A Feher, J A Hoch
Two-component signal transduction in Bacillus subtilis: how one organism sees its world.
J Bacteriol: 1999, 181(7);1975-83
[PubMed:10094672]
[WorldCat.org]
[DOI]
(P p)
