Difference between revisions of "GalE"

From SubtiWiki
Jump to: navigation, search
(References)
Line 16: Line 16:
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU38860 galE]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU38860 galE]
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/carbohydrate_metabolic_pathways.html Sugar catabolism]'''
+
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/subtipathways/search.php?enzyme=galE galE]'''
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 36 kDa, 4.776   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 36 kDa, 4.776   

Revision as of 11:59, 7 January 2014

  • Description: UDP glucose 4-epimerase

Gene name galE
Synonyms
Essential no
Product UDP glucose 4-epimerase
Function galactose utilization
Gene expression levels in SubtiExpress: galE
Metabolic function and regulation of this protein in SubtiPathways:
galE
MW, pI 36 kDa, 4.776
Gene length, protein length 1017 bp, 339 aa
Immediate neighbours yxkC, yxkA
Sequences Protein DNA DNA_with_flanks
Genetic context
GalE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
GalE expression.png



















Categories containing this gene/protein

utilization of specific carbon sources, biofilm formation

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU38860

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: UDP-glucose = UDP-galactose (according to Swiss-Prot)
  • Protein family: sugar epimerase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 1LRL (from Escherichia coli Y299C mutant, 57% identity, 71% similarity) PubMed
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
    • strongly repressed in response to glucose starvation in M9 medium PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References