Difference between revisions of "YidC2"

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(References)
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|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''yqjG''
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|''yidC2''
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''oxaAB ''
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|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yqjG, oxaAB ''
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Essential''' ||  no
 
|style="background:#ABCDEF;" align="center"| '''Essential''' ||  no
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=== Additional information===
 
=== Additional information===
 
  
 
=The protein=
 
=The protein=
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* '''Catalyzed reaction/ biological activity:'''  
 
* '''Catalyzed reaction/ biological activity:'''  
  
* '''Protein family:''' Type 2 subfamily (according to Swiss-Prot)
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* '''Protein family:'''
  
 
* '''Paralogous protein(s):''' [[SpoIIIJ]], one of the two proteins has to be present for viability [http://www.ncbi.nlm.nih.gov/sites/entrez/17114254 PubMed]
 
* '''Paralogous protein(s):''' [[SpoIIIJ]], one of the two proteins has to be present for viability [http://www.ncbi.nlm.nih.gov/sites/entrez/17114254 PubMed]
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* '''Kinetic information:'''
 
* '''Kinetic information:'''
  
* '''Domains:'''  
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* '''[[Domains]]:'''  
  
 
* '''Modification:'''
 
* '''Modification:'''
  
* '''Cofactor(s):'''
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* '''[[Cofactors]]:'''
  
 
* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=oxaAB_2483904_2484731_1 yidC2] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=oxaAB_2483904_2484731_1 yidC2] {{PubMed|22383849}}
  
* '''Sigma factor:'''  
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* '''[[Sigma factor]]:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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<pubmed>22688815 </pubmed>
 
<pubmed>22688815 </pubmed>
 
== Original publications ==
 
== Original publications ==
<pubmed>17114254, 15995216, 11889108, 12586834 19717609 19779460 21204254 22383849 22864117 </pubmed>
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<pubmed>17114254, 15995216, 11889108, 12586834 19717609 19779460 21204254 22383849 22864117 24442413 </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 10:12, 21 January 2014

  • Description: Sec-independent membrane protein translocase

Gene name yidC2
Synonyms yqjG, oxaAB
Essential no
Product Sec-independent membrane protein translocase
Function membrane insertion of proteins and protein secretion
MW, pI 30 kDa, 9.903
Gene length, protein length 825 bp, 275 aa
Immediate neighbours mifM, yqjF
Sequences Protein DNA DNA_with_flanks
Genetic context
YqjG context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YqjG expression.png















Categories containing this gene/protein

protein secretion, membrane proteins

This gene is a member of the following regulons

MifM regulon

The gene

Basic information

  • Locus tag: BSU23890

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): SpoIIIJ, one of the two proteins has to be present for viability PubMed

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
    • MifM: "attenuation mechanism", an mRNA hairpin of the yqjG transcript unfold upon translation arrest of MifM at decreased SpoIIIJ levels PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Original publications