Difference between revisions of "YclM"
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= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
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=== Additional information=== | === Additional information=== | ||
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=The protein= | =The protein= | ||
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* '''Kinetic information:''' | * '''Kinetic information:''' | ||
| − | * '''Domains:''' | + | * '''[[Domains]]:''' |
* '''Modification:''' | * '''Modification:''' | ||
| − | * ''' | + | * '''[[Cofactors]]:''' |
* '''Effectors of protein activity:''' inhibited by the simultaneous presence of threonine and lysine {{PubMed|11471740}} | * '''Effectors of protein activity:''' inhibited by the simultaneous presence of threonine and lysine {{PubMed|11471740}} | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yclM_430623_431987_-1 yclM] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yclM_430623_431987_-1 yclM] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' |
* '''Regulation:''' | * '''Regulation:''' | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| + | ** [[CodY]]: transcription repression {{PubMed|23569278}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
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<pubmed>19946135 ,, </pubmed> | <pubmed>19946135 ,, </pubmed> | ||
==Original publications== | ==Original publications== | ||
| − | <pubmed>11471740,,2152900, </pubmed> | + | <pubmed>11471740,23569278,2152900, 22383849</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 15:08, 19 May 2015
- Description: aspartokinase III
| Gene name | yclM |
| Synonyms | |
| Essential | no |
| Product | aspartokinase III |
| Function | unknown |
| Gene expression levels in SubtiExpress: yclM | |
| Metabolic function and regulation of this protein in SubtiPathways: yclM | |
| MW, pI | 49 kDa, 4.783 |
| Gene length, protein length | 1362 bp, 454 aa |
| Immediate neighbours | yczN, yclN |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
biosynthesis/ acquisition of amino acids
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU03790
Phenotypes of a mutant
Database entries
- BsubCyc: BSU03790
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: ATP + L-aspartate = ADP + 4-phospho-L-aspartate (according to Swiss-Prot)
- Protein family: aspartokinase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Modification:
- Effectors of protein activity: inhibited by the simultaneous presence of threonine and lysine PubMed
Database entries
- BsubCyc: BSU03790
- Structure:
- UniProt: P94417
- KEGG entry: [3]
- E.C. number: 2.7.2.4
Additional information
Expression and regulation
- Operon: yclM PubMed
- Regulation:
- Additional information:
- number of protein molecules per cell (minimal medium with glucose and ammonium): 78 PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Original publications
