Difference between revisions of "AmiE"

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|style="background:#ABCDEF;" align="center"|'''Function''' || recycling of cell wall material
 
|style="background:#ABCDEF;" align="center"|'''Function''' || recycling of cell wall material
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU01670 amiE]
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/murein/index.html Murein recycling]'''
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/murein/index.html Murein recycling]'''

Revision as of 09:11, 8 August 2012

  • Description: N-acetylmuramyl-L-alanine amidase

Gene name amiE
Synonyms ybbE
Essential no
Product N-acetylmuramyl-L-alanine amidase
Function recycling of cell wall material
Gene expression levels in SubtiExpress: amiE
Metabolic function and regulation of this protein in SubtiPathways:
Murein recycling
MW, pI 49 kDa, 9.349
Gene length, protein length 1323 bp, 441 aa
Immediate neighbours nagZ, murP
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YbbE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
AmiE expression.png
























Categories containing this gene/protein

cell wall degradation/ turnover

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU01670

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: hydrolyzes the amide bond between MurNAc and the L-alanine residue of the stem peptide PubMed
  • Protein family: UPF0214 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References