Difference between revisions of "Veg"
| Line 14: | Line 14: | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[biofilm formation]] | |style="background:#ABCDEF;" align="center"|'''Function''' || control of [[biofilm formation]] | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU00440 veg] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 9 kDa, 4.814 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 9 kDa, 4.814 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yabG]]'', ''[[sspF]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yabG]]'', ''[[sspF]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU00440 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU00440 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU00440 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:veg_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:veg_context.gif]] | ||
Revision as of 11:54, 13 May 2013
- Description: negative effector of SinR activity
| Gene name | veg |
| Synonyms | |
| Essential | no |
| Product | negative effector of SinR activity |
| Function | control of biofilm formation |
| Gene expression levels in SubtiExpress: veg | |
| MW, pI | 9 kDa, 4.814 |
| Gene length, protein length | 258 bp, 86 aa |
| Immediate neighbours | yabG, sspF |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU00440
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P37466
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: veg PubMed
- Regulation: constitutively expressed PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Ying Lei, Taku Oshima, Naotake Ogasawara, Shu Ishikawa
Functional analysis of the protein Veg, which stimulates biofilm formation in Bacillus subtilis.
J Bacteriol: 2013, 195(8);1697-705
[PubMed:23378512]
[WorldCat.org]
[DOI]
(I p)
Tatsuya Fukushima, Shu Ishikawa, Hiroki Yamamoto, Naotake Ogasawara, Junichi Sekiguchi
Transcriptional, functional and cytochemical analyses of the veg gene in Bacillus subtilis.
J Biochem: 2003, 133(4);475-83
[PubMed:12761295]
[WorldCat.org]
[DOI]
(P p)
