Difference between revisions of "YtnP"
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|style="background:#ABCDEF;" align="center"|'''Function''' || defense against competing bacteria | |style="background:#ABCDEF;" align="center"|'''Function''' || defense against competing bacteria | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU29890 ytnP] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 29 kDa, 5.927 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 29 kDa, 5.927 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[malS]]'', ''[[trmB]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[malS]]'', ''[[trmB]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU29890 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU29890 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU29890 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:ytnP_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:ytnP_context.gif]] | ||
Revision as of 13:38, 13 May 2013
- Description: lactonase-homolog protein, inhibits the signalling pathway required for the streptomycin production and development of aerial mycelium in Streptomyces griseus
| Gene name | ytnP |
| Synonyms | |
| Essential | no |
| Product | lactonase-homolog protein |
| Function | defense against competing bacteria |
| Gene expression levels in SubtiExpress: ytnP | |
| MW, pI | 29 kDa, 5.927 |
| Gene length, protein length | 768 bp, 256 aa |
| Immediate neighbours | malS, trmB |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
phosphoproteins, resistance against toxins/ antibiotics
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU29890
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification: phosphorylation on Ser-36 PubMed
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: O34760
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- induced in the presence of streptomycin PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
