Difference between revisions of "HemAT"
(→References) |
|||
Line 53: | Line 53: | ||
=== Database entries === | === Database entries === | ||
+ | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU10380&redirect=T BSU10380] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/hemAT.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/hemAT.html] | ||
Line 92: | Line 93: | ||
=== Database entries === | === Database entries === | ||
+ | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU10380&redirect=T BSU10380] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1OR4 1OR4] (in cyano-liganded form), [http://www.rcsb.org/pdb/explore.do?structureId=1OR6 1OR6] | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1OR4 1OR4] (in cyano-liganded form), [http://www.rcsb.org/pdb/explore.do?structureId=1OR6 1OR6] |
Revision as of 13:21, 2 April 2014
- Description: soluble chemotaxis receptor, heme-containing O(2) sensor protein
Gene name | hemAT |
Synonyms | yhfV |
Essential | no |
Product | haem-based aerotactic transducer |
Function | movement towards oxygen |
Gene expression levels in SubtiExpress: hemAT | |
Interactions involving this protein in SubtInteract: HemAT | |
MW, pI | 48 kDa, 5.441 |
Gene length, protein length | 1296 bp, 432 aa |
Immediate neighbours | yhfU, yhfW |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU10380
Phenotypes of a mutant
Database entries
- BsubCyc: BSU10380
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s): heme
- Effectors of protein activity:
Database entries
- BsubCyc: BSU10380
- UniProt: O07621
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: hemAT PubMed
- Regulation:
- Regulatory mechanism:
- Additional information:
- in minimal medium, HemAT is present with 19,000 +/- 3,900 molecules per cell PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Markéta Martínková, Kenichi Kitanishi, Toru Shimizu
Heme-based globin-coupled oxygen sensors: linking oxygen binding to functional regulation of diguanylate cyclase, histidine kinase, and methyl-accepting chemotaxis.
J Biol Chem: 2013, 288(39);27702-11
[PubMed:23928310]
[WorldCat.org]
[DOI]
(I p)
Original publications