Difference between revisions of "YyaC"

From SubtiWiki
Jump to: navigation, search
Line 35: Line 35:
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
 
 
 
<br/><br/>
 
<br/><br/>
  
Line 63: Line 59:
  
 
=== Additional information===
 
=== Additional information===
 
 
 
  
 
=The protein=
 
=The protein=
Line 108: Line 101:
 
=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:''' ''yyaC'' (according to [http://dbtbs.hgc.jp/COG/prom/yyaC.html DBTBS])
+
* '''Operon:''' ''yyaC'' {{PubMed|22383849}}
  
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yyaC_4204900_4205517_1 yyaC] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yyaC_4204900_4205517_1 yyaC] {{PubMed|22383849}}
  
* '''Sigma factor:''' [[SigF]] {{PubMed|16497325}}
+
* '''[[Sigma factor]]:''' [[SigF]] {{PubMed|16497325}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
** expressed early during sporulation in the forespore ([[SigF]]) {{PubMed|16497325,15699190}}
+
** expressed early during [[sporulation]] in the forespore ([[SigF]]) {{PubMed|16497325,15699190}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  

Revision as of 15:01, 6 April 2015

  • Description: sporulation protein

Gene name yyaC
Synonyms
Essential no
Product sporulation protein
Function unknown
Gene expression levels in SubtiExpress: yyaC
MW, pI 22 kDa, 10.176
Gene length, protein length 615 bp, 205 aa
Immediate neighbours yyaD, spo0J
Sequences Protein DNA DNA_with_flanks
Genetic context
YyaC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YyaC expression.png















Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

SigF regulon

The gene

Basic information

  • Locus tag: BSU40950

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References