YabC

Gene name	yabC
Synonyms
Essential	no
Product	16S rRNA methyltransferase
Function	rRNA modification
Gene expression levels in SubtiExpress: yabC
MW, pI	32 kDa, 5.518
Gene length, protein length	876 bp, 292 aa
Immediate neighbours	yazA, abrB
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

translation

The gene

Basic information

• Locus tag: BSU00360

Database entries

• DBTBS entry: no entry

• SubtiList entry: [1]

Additional information

• The E.coli homolog: rsmI

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: UPF0011 family (according to Swiss-Prot)

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• Structure:

• UniProt: P37544

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon:

• Expression browser: yabC PubMed

• Sigma factor:

• Regulation:

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Satoshi Kimura, Tsutomu Suzuki
Fine-tuning of the ribosomal decoding center by conserved methyl-modifications in the Escherichia coli 16S rRNA.
Nucleic Acids Res: 2010, 38(4);1341-52
[PubMed:19965768] [WorldCat.org] [DOI] (I p)