ykuO
168
unknown
locus
BSU_14160
Molecular weight
33.46 kDa
pI
8.13
function
unknown
product
unknown
essential
no
synonyms
ykuO
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms
This gene is a member of the following regulons
Gene
Coordinates
1,487,504 → 1,488,397
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The protein
Structure
[AF|O34879]
Expression and Regulation
Operons
genes
[gene|0932DDC285635C02067A3302CEDA302FE4269179|ykuN]-[gene|CEC1B5DF1E548597FE333895ECA476AB9DFFFDD7|ykuO]-[gene|ECAFD2873ADE6B65C7B3C27FF26E0FAAA74839CC|ykuP]
description
[Pubmed|12354229]
regulation
expressed under anaerobic conditions ([protein|1E829D639BADDC6BDC9B5FB4C97A632A53FDDB24|resD]) [Pubmed|24214949]
induced by iron starvation (second wave) ([protein|F899F1EE27E6D503BCC06BC52E3C7FD80B8EF725|fur]) [pubmed|29133393,12354229]
regulatory mechanism
[protein|1E829D639BADDC6BDC9B5FB4C97A632A53FDDB24|resD]: activation, [Pubmed|24214949], in [regulon|protein:1E829D639BADDC6BDC9B5FB4C97A632A53FDDB24|resD regulon]
[protein|65E2F7197D46F5C884CC96018EE4F3EEE94FFA18|kre]: repression, in [regulon|protein:65E2F7197D46F5C884CC96018EE4F3EEE94FFA18|kre regulon]
[protein|EC6697D5D945B7E5083AFED9218748763C443278|nsrR]: repression, [Pubmed|24214949], in [regulon|protein:EC6697D5D945B7E5083AFED9218748763C443278|nsrR regulon]
[protein|F899F1EE27E6D503BCC06BC52E3C7FD80B8EF725|fur]: repression, [pubmed|12354229], in [regulon|protein:F899F1EE27E6D503BCC06BC52E3C7FD80B8EF725|fur regulon]
sigma factors
[protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|sigA]: sigma factor, [Pubmed|12354229], in [regulon|protein:360F48D576DE950DF79C1A2677B7A35A8D8CC30C|sigA regulon]
[protein|3DEAC421B4B173C6BBC700E57790751B7AFDF319|sigI]: sigma factor, [pubmed|29914988], in [regulon|protein:3DEAC421B4B173C6BBC700E57790751B7AFDF319|sigI regulon]
additional information
the ''[protein|0932DDC285635C02067A3302CEDA302FE4269179|ykuN]-[protein|CEC1B5DF1E548597FE333895ECA476AB9DFFFDD7|ykuO]-[protein|ECAFD2873ADE6B65C7B3C27FF26E0FAAA74839CC|ykuP]'' operon is strongly unregulated in a ''[wiki|kre]'' mutant [Pubmed|26110430]
Biological materials
Mutant
MGNA-B338 (ykuO::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1337 NBRP B. subtilis, Japan]
BKE14160 (Δ[gene|CEC1B5DF1E548597FE333895ECA476AB9DFFFDD7|ykuO]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE14160 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CGATGCCGTAACAGCGGTTG, downstream forward: _UP4_ATTCATTAGAGGAGGAACAA
BKK14160 (Δ[gene|CEC1B5DF1E548597FE333895ECA476AB9DFFFDD7|ykuO]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK14160 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CGATGCCGTAACAGCGGTTG, downstream forward: _UP4_ATTCATTAGAGGAGGAACAA
References
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Time of last update: 2024-12-04 15:28:23
Author of last update: Jstuelk