Difference between revisions of "YfkJ"

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m (Reverted edits by 134.76.70.252 (talk) to last revision by Lflorez)
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* '''Operon:''' ''[[yfkJ]]-[[yfkI]]-[[yfkH]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yfkJIH.html DBTBS])
 
* '''Operon:''' ''[[yfkJ]]-[[yfkI]]-[[yfkH]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yfkJIH.html DBTBS])
  
* '''[[Sigma factor]]:''' SigA {{PubMed|11532142}}, [[SigB]] {{PubMed|15805528,11532142}}  
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yfkJ_862004_862474_1 yfkJ] {{PubMed|22383849}}
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* '''Sigma factor:''' SigA {{PubMed|11532142}}, [[SigB]] {{PubMed|15805528,11532142}}  
  
 
* '''Regulation:'''  induced by stress ([[SigB]]) {{PubMed|15805528,11532142}}
 
* '''Regulation:'''  induced by stress ([[SigB]]) {{PubMed|15805528,11532142}}
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* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
  
* '''Additional information:'''  
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* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 16:10, 12 April 2012

Gene name yfkJ
Synonyms
Essential no
Product protein tyrosine phosphatase
Function survival of ethanol stress
MW, pI 17 kDa, 4.563
Gene length, protein length 468 bp, 156 aa
Immediate neighbours yfkK, yfkI
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YfkJ context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

protein modification, general stress proteins (controlled by SigB)

This gene is a member of the following regulons

SigB regulon

The gene

Basic information

  • Locus tag: BSU07880

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Protein tyrosine phosphate + H2O = protein tyrosine + phosphate (according to Swiss-Prot)
  • Protein family: low molecular weight phosphotyrosine protein phosphatase family (according to Swiss-Prot)
  • Paralogous protein(s): YwlE

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References